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Creators/Authors contains: "Lin, Michael"

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  1. Alarm signal propagation through ant colonies provides an empirically tractable context for analysing information flow through a natural system, with useful insights for network dynamics in other social animals. Here, we develop a methodological approach to track alarm spread within a group of harvester ants, Pogonomyrmex californicus . We initially alarmed three ants and tracked subsequent signal transmission through the colony. Because there was no actual standing threat, the false alarm allowed us to assess amplification and adaptive damping of the collective alarm response. We trained a random forest regression model to quantify alarm behaviour of individual workers from multiple movement features. Our approach translates subjective categorical alarm scores into a reliable, continuous variable. We combined these assessments with automatically tracked proximity data to construct an alarm propagation network. This method enables analyses of spatio-temporal patterns in alarm signal propagation in a group of ants and provides an opportunity to integrate individual and collective alarm response. Using this system, alarm propagation can be manipulated and assessed to ask and answer a wide range of questions related to information and misinformation flow in social networks. 
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  2. null (Ed.)
  3. Monitoring voltage dynamics in defined neurons deep in the brain is critical for unraveling the function of neuronal circuits but is challenging due to the limited performance of existing tools. In particular, while genetically encoded voltage indicators have shown promise for optical detection of voltage transients, many indicators exhibit low sensitivity when imaged under two-photon illumination. Previous studies thus fell short of visualizing voltage dynamics in individual neurons in single trials. Here, we report ASAP2s, a novel voltage indicator with improved sensitivity. By imaging ASAP2s using random-access multi-photon microscopy, we demonstrate robust single-trial detection of action potentials in organotypic slice cultures. We also show that ASAP2s enables two-photon imaging of graded potentials in organotypic slice cultures and in Drosophila. These results demonstrate that the combination of ASAP2s and fast two-photon imaging methods enables detection of neural electrical activity with subcellular spatial resolution and millisecond-timescale precision. 
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  4. The gap between chronological age (CA) and biological brain age, as estimated from magnetic resonance images (MRIs), reflects how individual patterns of neuroanatomic aging deviate from their typical trajectories. MRI-derived brain age (BA) estimates are often obtained using deep learning models that may perform relatively poorly on new data or that lack neuroanatomic interpretability. This study introduces a convolutional neural network (CNN) to estimate BA after training on the MRIs of 4,681 cognitively normal (CN) participants and testing on 1,170 CN participants from an independent sample. BA estimation errors are notably lower than those of previous studies. At both individual and cohort levels, the CNN provides detailed anatomic maps of brain aging patterns that reveal sex dimorphisms and neurocognitive trajectories in adults with mild cognitive impairment (MCI, N  = 351) and Alzheimer’s disease (AD, N  = 359). In individuals with MCI (54% of whom were diagnosed with dementia within 10.9 y from MRI acquisition), BA is significantly better than CA in capturing dementia symptom severity, functional disability, and executive function. Profiles of sex dimorphism and lateralization in brain aging also map onto patterns of neuroanatomic change that reflect cognitive decline. Significant associations between BA and neurocognitive measures suggest that the proposed framework can map, systematically, the relationship between aging-related neuroanatomy changes in CN individuals and in participants with MCI or AD. Early identification of such neuroanatomy changes can help to screen individuals according to their AD risk. 
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